SNV calling from NGS data refers to a range of methods for identifying the existence of SNVs from the results of NGS experiments. (http://en.wikipedia.org/wiki/SNV_calling_from_NGS_data)
It's one of the Bioinformatics problems.
Table of Contents
관련정보 #
프로그램 소개 #
- SNiPlay3 – a web-based application for exploration and large scale analyses of genomic variations RNA-Seq Blog 2015-06-5
블로그 포스트 #
- Inconsistency of somatic SNVs called in WES and RNA-Seq data RNA-Seq Blog : 27 nomal-tumor pairs로 부터 Exome sequencing과 RNA-seq을 각각 진행하여, SNV calling 일치정도를 확인함
- Simple consensus approach improves somatic mutation prediction accuracy 단맛만좋아요 : 2015 한국유전체학회 동계심포지엄 발표자료 공유 - Somatic mutation calling 관련
- Somatic mutation calling in Low-allelic-fraction 단맛만좋아요 : Broad의 MuTect (Nature Biotechnology 출신), 워싱턴 대학의 VarScan2(Renome Research 출신), 연세대의 Virmid (Genome Biology 출신), 일루미나의 Strelka (Bioinformatics 출신) 4명 앞으로 나와!
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