CODEX
#
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- (rev. 7)
- Hyungyong Kim
Structured data
- About
- Exome sequencing
- CNV calling from NGS data
- Programming Language
- Bioconductor
- R
- URL
- http://www.bioconductor.org/packages/devel/bioc/html/CODEX.html
A normalization and CNV calling procedure for Whole Exome sequencing data. CODEX relies on the availability of multiple samples processed using the same sequencing pipeline for normalization, and does not require matched controls.
Bioconductor 3.1 이상에서 구동되며, 그러기 위해서는 R 3.2 이상이어야 한다.
Incoming Links #
Related Articles (Article 0) #
- CNV calling from NGS data
- CODEX: a normalization and copy number variation detection method for whole exome sequencing
Related Medical Scholarly Articles (MedicalScholarlyArticle 1) #
- CODEX: a normalization and copy number variation detection method for whole exome sequencing
- Gene-based comparative analysis of tools for estimating copy number alterations using whole-exome sequencing data
Suggested Pages #
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- 0.044 Allele-specific copy number profiling by next-generation DNA sequencing
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- 0.025 Comparative study of exome copy number variation estimation tools using array comparative genomic hybridization as control
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